Webgreedy SCP solving algo rithm to identify the mi nimum set that will ampli fy all membe rs of the alignm ent. MA TERIALS AND MET HODS Al gorithm an d implement ation Linha rt and Sham ir (13) provide an extensi ve descrip tion of the degene rate prime r desi gn problem and its comple xity, whi ch is summari zed here. Fix an alphabet S ! {A, T, G, WebAug 13, 2024 · To solve the SCP, a fast greedy algorithm is applied which provides a good approximate solution in polynomial time. The resulting optimal subset of removed items determines the values returned by the objective functions, i.e., the quality of a selected subset of candidate transactions.
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